LOOS: A Tool for analyzing molecular simulations, Tod D. Romo and Alan Grossfield (pdf)
Study of Ultra-Fast Rhodopsin Activation Dynamics with Molecular Dynamics Simulations, Leslie A. Salas-Estrada, Derek Mendez, Jose D. Meza-Aguilar, Suchithranga M. D. C. Perera, Abhishek Singharoy, Andrey V. Struts, Nadia A. Zatsepin, Richard A. Kirian, Thomas D. Grant, Petra Fromme, Michael F. Brown and Alan Grossfield (pdf)
Effects of cholesterol on fengycin, an antimicrobial lipopeptide, using weighted ensemble method, Sreyoshi Sur, Tod D. Romo, Leslie A. Salas-Estrada, and Alan Grossfield (pdf)
Exploring hydrogen bond geometry in RNA with F-SAPT, Louis G. Smith, Chapin E. Cavender, Alan Grossfield, and David H. Mathews (pdf)
Developing an accurate all-atom fixed-charge force field for RNA with implicitly polarized charges, Chapin E. Cavender, Louis G. Smith, Alan Grossfield, & David H. Mathews (pdf)